You are currently viewing Agarose Gel Electrophoresis Procedure

Agarose Gel Electrophoresis Procedure

Certainly, here is a procedure for agarose gel electrophoresis, a fundamental technique in molecular biology used by Heredity Biosciences

Materials Needed:

  1. Agarose powder
  2. Electrophoresis buffer (e.g., TAE or TBE)
  3. DNA samples
  4. DNA loading dye
  5. Gel electrophoresis chamber
  6. Gel casting tray and comb
  7. Power supply
  8. UV transilluminator
  9. Ethidium bromide or a safe alternative (for staining)

Procedure:

  1. Preparing Agarose Gel:
    • Weigh the appropriate amount of agarose powder based on the desired gel concentration (usually 0.7-2% agarose).
    • Mix the agarose with electrophoresis buffer in a flask or beaker.
    • Heat the mixture in a microwave or on a hotplate until it fully dissolves. Be cautious to avoid boiling.
    • Allow the agarose solution to cool to around 60°C.
  2. Gel Casting:
    • Place the gel casting tray with a comb in a level position.
    • Pour the warm agarose solution into the tray to the desired gel thickness.
    • Allow the gel to solidify by cooling (15-30 minutes).
  3. Preparing DNA Samples:
    • Mix your DNA samples with DNA loading dye to make them visible during electrophoresis.
    • Load a known molecular weight marker for reference.
  4. Loading the Gel:
    • Remove the comb from the gel.
    • Carefully load your DNA samples and marker into the wells using a micropipette.
  5. Running the Electrophoresis:
    • Place the gel in the electrophoresis chamber filled with electrophoresis buffer.
    • Connect the chamber to a power supply.
    • Apply a voltage (usually 100-120 V) and run the electrophoresis for an appropriate time (typically 30-60 minutes) until the DNA has migrated sufficiently.
  6. Visualization:
    • After electrophoresis, carefully remove the gel from the chamber.
    • Stain the gel with ethidium bromide or a safe alternative and let it sit for about 15 minutes.
  7. Documentation:
    • Place the gel on a UV transilluminator and observe the DNA bands. Take a photograph for documentation.
  8. Analysis:
    • Measure the sizes of DNA fragments using the reference marker and analyze the results.
  9. Disposal:
    • Dispose of the gel and buffer according to your laboratory’s waste disposal guidelines.

Heredity Biosciences uses agarose gel electrophoresis for various applications, including DNA fragment analysis, DNA size determination, and DNA purity assessment. This technique plays a crucial role in genetic research and molecular biology studies.

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